CCB News Listing

Bioinformatics journal club Oct 17

Pilib will present a paper “LOTUS: A single- and multitask machine learning algorithm for the prediction of cancer driver genes” (PLOS Computational Biology).

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Bioinformatics journal club Oct 10

Cathal will present a paper “Variation of mutational burden in healthy human tissues suggests non-random strand segregation and allows measuring somatic mutation rates” (PLOS Computational Biology)

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Bioinformatics journal club Oct 3

Aaron will present a paper “Fingerprining Non-Terran Biosignature” (ASTROBIOLOGY).

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Bioinformatics journal club Sep 26

Haixuan will present a paper “Prioritizing network communities” (Nature Communications).

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Postdoctoral researcher position available

Applications are invited for a postdoctoral researcher position to work in the Seoighe Research Group. Please click this link for information on the position and how to apply.

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Bioinformatics journal club 14 Feb

Brian and Pratham will present the following two papers respectively: The Overlap of Lung Tissue Transcriptome of Smoke Exposed Mice with Human Smoking and COPD Link: https://www.nature.com/articles/s41598-018-30313-z Genomic analysis of head and neck cancer cases from two high incidence regions

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Bioinformatics journal club 7 Feb

Anuprita and Conor will present the following two papers respectively: Insights into imprinting from parent-of-origin phased methylomes and transcriptomes Link: https://www.nature.com/articles/s41588-018-0232-7 The Importance of Bottlenecks in Protein Networks: Correlation with Gene Essentiality and Expression Dynamics Link: https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.0030059

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Bioinformatics journal club 31 Jan

Shweta and Shane will present the following two papers respectively: regQTLs: Single nucleotide polymorphisms that modulate microRNA regulation of gene expression in tumors Link: https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1007837 Detecting potential pleiotropy across cardiovascular and neurological diseases using univariate, bivariate, and multivariate methods on

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Bioinformatics journal club 29 November

Andrew will present “Base editing: precision chemistry on the genome and transcriptome of living cells”. Link: https://www.nature.com/articles/s41576-018-0059-1

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Bioinformatics journal club 22 November

Siobhan will present “Reliability of Whole-Exome Sequencing for Assessing Intratumor Genetic Heterogeneity” Link: https://www.sciencedirect.com/science/article/pii/S2211124718316358?via%3Dihub

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